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Intron Name: Anas_platyrhynchos_platyrhynchos_28_4112858_4113782_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4112858 - 4113782

Intron Length:

925

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAGGAAGC

5'SS Class:

strong_major

3'SS Sequence:

CCTCTGTTACCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTACAT

U12 Branch Point Sequence:

CATCTGTTAAGC

Flanking Amino Acid:

YYRGAQGVVLVYDVTRKDTF

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.73

69.9

41.1

Major BPS

70.2

0.5

1.1

77.2

Major PPT

72.6

0.51

0.9

65.3

39.9

Minor 5ss

32.4

-2

3.2

43.2

Minor BPS

45.4

-0.3

2.3

56.04

42.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000002731

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002755

4098714 - 4117171

18458