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Intron Name: Anas_platyrhynchos_platyrhynchos_28_4113902_4114705_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4113902 - 4114705

Intron Length:

804

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTCAGTTTA

5'SS Class:

strong_major

3'SS Sequence:

TTCGTCTCTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTTCAT

U12 Branch Point Sequence:

ATGTTCTTCATT

Flanking Amino Acid:

KMLVGNKTDKPDREVERREG

Intron Amino Acid Position:

126

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.3

0.79

1.2

84.1

30.2

Major BPS

87.4

0.93

0.9

87.9

29.5

Major PPT

82.6

0.73

0.8

77.1

31.6

Minor 5ss

39.2

-1.2

2.8

46.3

Minor BPS

61.7

0.45

1.7

77.35

39.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000002731

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002755

4098714 - 4117171

18458