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Intron Name: Anas_platyrhynchos_platyrhynchos_28_4119020_4119419_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4119020 - 4119419

Intron Length:

400

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAATGGTA

5'SS Class:

strong_major

3'SS Sequence:

ATGTCTTGCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTCAT

U12 Branch Point Sequence:

ATGTCTTGCACA

Flanking Amino Acid:

WQHFNKRRIQEDQKRIYQIE

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.9

0.73

34.9

Major BPS

94.9

1.12

0.6

93.9

14.7

Major PPT

0.45

64.8

40.8

Minor 5ss

32.9

-2

3.6

46.7

48.6

Minor BPS

51.3

0.03

1.9

66.3

40.4

Associated Gene:

Gene:

CFAP97D1

Ensembl Gene ID:

ENSAPLG00000002730

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024079

4117392 - 4120310

2919

ENSAPLT00000002751

4117587 - 4120926

3340