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Intron Name: Anas_platyrhynchos_platyrhynchos_28_4119539_4119999_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4119539 - 4119999

Intron Length:

461

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAGCTGGT

5'SS Class:

major

3'SS Sequence:

TTTTTGCTTACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTTCAT

U12 Branch Point Sequence:

TTTTGCTTACAG

Flanking Amino Acid:

VDCWNEHFQRRSNRDAQNRK

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.2

0.52

1.2

67.1

44.6

Major BPS

84.8

0.86

85.7

34.9

Major PPT

89.8

0.9

0.7

84.2

30.9

Minor 5ss

38.6

-1.3

3.5

58.3

46.4

Minor BPS

53.1

-0

2.2

68.4

44.9

Associated Gene:

Gene:

CFAP97D1

Ensembl Gene ID:

ENSAPLG00000002730

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024079

4117392 - 4120310

2919

ENSAPLT00000002751

4117587 - 4120926

3340