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Intron Name: Anas_platyrhynchos_platyrhynchos_28_4120124_4120250_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4120124 - 4120250

Intron Length:

127

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

CAG|GCATGTATT

5'SS Class:

strong_major

3'SS Sequence:

TTTTTCCCTTTAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAATGAT

U12 Branch Point Sequence:

AAACCTGTAACG

Flanking Amino Acid:

YQKKSDTGWQQTTKYFKQTT

Intron Amino Acid Position:

119

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.3

0.97

0.9

90.9

28.7

Major BPS

76.8

0.67

40.9

Major PPT

87.4

0.84

0.6

86.4

20.3

Minor 5ss

37.4

-1.4

3.9

59.2

45.4

Minor BPS

47.9

-0.2

53.44

41.1

Associated Gene:

Gene:

CFAP97D1

Ensembl Gene ID:

ENSAPLG00000002730

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024079

4117392 - 4120310

2919

ENSAPLT00000002751

4117587 - 4120926

3340