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Intron Name: Anas_platyrhynchos_platyrhynchos_28_4123557_4124190_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4123557 - 4124190

Intron Length:

634

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTC|GTAAGTATT

5'SS Class:

major

3'SS Sequence:

TGTTGATCAGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTTTTAT

U12 Branch Point Sequence:

TTTGTTTTATCT

Flanking Amino Acid:

PVSEEISTPFDEEQQEIINS

Intron Amino Acid Position:

528

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.3

0.6

1.3

83.5

Major BPS

78.7

0.71

1.2

71.7

44.6

Major PPT

69.3

0.44

63.9

41.8

Minor 5ss

43.2

-0.7

2.9

61.1

37.5

Minor BPS

0.52

1.7

82.72

39.3

Associated Gene:

Gene:

MPP3

Ensembl Gene ID:

ENSAPLG00000007360

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002750

4122981 - 4140381

17401