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Intron Name: Anas_platyrhynchos_platyrhynchos_28_4131836_4132872_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4131836 - 4132872

Intron Length:

1037

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGCAAC

5'SS Class:

strong_major

3'SS Sequence:

CTTTCTTTTGAAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCCAAAT

U12 Branch Point Sequence:

TTTCTTTTGAAG

Flanking Amino Acid:

KEEDRLKDSKVFMRALFCYN

Intron Amino Acid Position:

229

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.5

0.77

36.6

Major BPS

64.7

0.37

1.1

69.5

34.1

Major PPT

80.6

0.69

82.5

26.5

Minor 5ss

45.8

-0.4

2.6

59.7

45.1

Minor BPS

56.6

0.06

1.5

64.42

37.4

Associated Gene:

Gene:

MPP3

Ensembl Gene ID:

ENSAPLG00000007360

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000048353

4131418 - 4140381

8964

ENSAPLT00000031658

4128609 - 4140381

11773

ENSAPLT00000007643

4128609 - 4140381

11773

ENSAPLT00000002750

4122981 - 4140381

17401