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Intron Name: Anas_platyrhynchos_platyrhynchos_28_4135843_4136082_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4135843 - 4136082

Intron Length:

240

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTAAATTTC

5'SS Class:

strong_major

3'SS Sequence:

GCTCTCTGTGTAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTCTGAA

U12 Branch Point Sequence:

CAAGTCTGAACT

Flanking Amino Acid:

IMRGGAADRSVSGERWTLLE

Intron Amino Acid Position:

175

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.4

0.72

0.9

77.3

31.8

Major BPS

64.4

0.36

1.2

57.3

41.7

Major PPT

70.1

0.45

0.9

65.3

36.2

Minor 5ss

44.3

-0.6

2.9

57.9

42.1

Minor BPS

0.2

1.6

66.44

43.9

Associated Gene:

Gene:

MPP3

Ensembl Gene ID:

ENSAPLG00000007360

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022870

4135569 - 4140381

4813