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Intron Name: Anas_platyrhynchos_platyrhynchos_28_4138080_4139178_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4138080 - 4139178

Intron Length:

1099

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAAAGTT

5'SS Class:

strong_major

3'SS Sequence:

TTTTATTTTAAAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTTATTTTAAAG

Flanking Amino Acid:

SEKSLSYLMKVIEELQTAPV

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.8

0.9

81.3

30.4

Major BPS

96.5

1.15

0.6

34.2

Major PPT

81.2

0.7

82.5

32.7

Minor 5ss

35.7

-1.6

3.7

55.7

48.5

Minor BPS

63.9

0.3

1.5

68.85

38.6

Associated Gene:

Gene:

MPP3

Ensembl Gene ID:

ENSAPLG00000007360

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031658

4128609 - 4140381

11773