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Intron Name: Anas_platyrhynchos_platyrhynchos_28_4146491_4151759_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4146491 - 4151759

Intron Length:

5269

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGGCTC

5'SS Class:

strong_major

3'SS Sequence:

TTTTCATCTTTAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTCAT

U12 Branch Point Sequence:

GTTTACTGAACT

Flanking Amino Acid:

SAQIRCKLIKSRQTPEGEFL

Intron Amino Acid Position:

218

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.2

0.83

0.9

38.2

Major BPS

100

1.24

0.5

100

Major PPT

0.77

0.7

82.6

Minor 5ss

29.9

-2.3

3.4

45.6

Minor BPS

70.4

0.72

1.6

87.42

37.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000007287

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007564

4145840 - 4152784

6945