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Intron Name: Anas_platyrhynchos_platyrhynchos_28_4151977_4152305_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4151977 - 4152305

Intron Length:

329

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCG|GTAAGCTTT

5'SS Class:

strong_major

3'SS Sequence:

TCTGTTTCCACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTACAAT

U12 Branch Point Sequence:

TCTGTTTCCACA

Flanking Amino Acid:

VILEGIVETTGMTCQARTSY

Intron Amino Acid Position:

290

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.1

0.78

79.1

37.5

Major BPS

65.2

0.38

1.3

73.4

38.5

Major PPT

0.7

0.8

75.9

32.8

Minor 5ss

0.04

2.8

74.4

41.8

Minor BPS

45.3

-0.3

42.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000007287

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007564

4145840 - 4152784

6945