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Intron Name: Anas_platyrhynchos_platyrhynchos_28_4175073_4175621_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4175073 - 4175621

Intron Length:

549

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGGCTG

5'SS Class:

strong_major

3'SS Sequence:

GTTTCCATTCCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AATTTAT

U12 Branch Point Sequence:

TTTGTTTCCATT

Flanking Amino Acid:

GLARLYSSEESRPYTNKVIT

Intron Amino Acid Position:

258

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.2

0.81

0.9

69.5

42.7

Major BPS

79.9

0.74

0.9

69.7

37.1

Major PPT

80.1

0.68

0.9

70.7

39.8

Minor 5ss

28.9

-2.4

3.3

37.6

47.1

Minor BPS

46.9

-0.1

70.72

41.5

Associated Gene:

Gene:

CDK12

Ensembl Gene ID:

ENSAPLG00000013281

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013847

4169307 - 4180373

11067