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Intron Name: Anas_platyrhynchos_platyrhynchos_28_4176728_4177344_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4176728 - 4177344

Intron Length:

617

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGTGTTT

5'SS Class:

major

3'SS Sequence:

TTTATTTTACCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAATCAT

U12 Branch Point Sequence:

TTTATTTTACCA

Flanking Amino Acid:

QDALDFKKDKGAFYLVFEYM

Intron Amino Acid Position:

176

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.7

0.54

1.1

72.3

39.7

Major BPS

80.4

0.76

80.3

31.8

Major PPT

83.6

0.76

0.9

78.1

39.9

Minor 5ss

41.3

-1

3.7

64.1

47.4

Minor BPS

62.8

0.4

1.6

75.15

36.6

Associated Gene:

Gene:

CDK12

Ensembl Gene ID:

ENSAPLG00000013281

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026358

4173853 - 4180373

6521

ENSAPLT00000013847

4169307 - 4180373

11067