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Intron Name: Anas_platyrhynchos_platyrhynchos_28_4177516_4177937_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4177516 - 4177937

Intron Length:

422

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAAGATC

5'SS Class:

strong_major

3'SS Sequence:

CGTGTTCTGGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTAAC

U12 Branch Point Sequence:

GAGGCTTTAACG

Flanking Amino Acid:

QVYKAKDKDTGELVALKKVR

Intron Amino Acid Position:

119

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.8

0.77

0.9

79.3

34.3

Major BPS

77.3

0.68

79.3

29.4

Major PPT

69.7

0.44

1.1

65.3

41.1

Minor 5ss

36.2

-1.6

3.4

51.2

45.7

Minor BPS

59.5

0.16

1.5

56.95

44.6

Associated Gene:

Gene:

CDK12

Ensembl Gene ID:

ENSAPLG00000013281

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026358

4173853 - 4180373

6521

ENSAPLT00000013847

4169307 - 4180373

11067