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Intron Name: Anas_platyrhynchos_platyrhynchos_28_4178078_4178838_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4178078 - 4178838

Intron Length:

761

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGGCTT

5'SS Class:

strong_major

3'SS Sequence:

TTGCCTCTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTCTGAC

U12 Branch Point Sequence:

GTGCACTCAGCT

Flanking Amino Acid:

PPQQPFKKRPKICCPRYGER

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.7

0.72

76.2

39.3

Major BPS

63.7

0.34

1.2

41.8

Major PPT

83.5

0.75

0.8

Minor 5ss

38.4

-1.3

3.6

56.8

41.8

Minor BPS

-0.2

1.9

64.19

45.2

Associated Gene:

Gene:

CDK12

Ensembl Gene ID:

ENSAPLG00000013281

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026358

4173853 - 4180373

6521

ENSAPLT00000013847

4169307 - 4180373

11067