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Intron Name: Anas_platyrhynchos_platyrhynchos_28_4194741_4195322_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4194741 - 4195322

Intron Length:

582

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAAGAACG

5'SS Class:

strong_major

3'SS Sequence:

GCCTCTCTTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTTAC

U12 Branch Point Sequence:

TGTTACAGACCT

Flanking Amino Acid:

LDLSKMAGMYWQATNANPLD

Intron Amino Acid Position:

143

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.8

0.77

0.9

70.8

39.2

Major BPS

71.4

0.53

1.2

63.4

Major PPT

78.8

0.65

0.8

72.4

32.3

Minor 5ss

33.9

-1.8

2.9

Minor BPS

46.2

-0.2

2.1

72.18

43.7

Associated Gene:

Gene:

MED1

Ensembl Gene ID:

ENSAPLG00000030415

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038535

4191975 - 4205431

13457