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Intron Name: Anas_platyrhynchos_platyrhynchos_28_4196450_4196740_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4196450 - 4196740

Intron Length:

291

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAAGCAGA

5'SS Class:

major

3'SS Sequence:

CTTGATTTTCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATTAAC

U12 Branch Point Sequence:

ATTAACTTGATT

Flanking Amino Acid:

IMGSHPVDSKGTPSFSSITS

Intron Amino Acid Position:

235

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.9

0.71

68.9

43.8

Major BPS

81.9

0.79

0.8

81.9

Major PPT

81.8

0.71

0.9

72.8

41.9

Minor 5ss

38.3

-1.3

2.8

40.4

45.5

Minor BPS

63.3

0.5

1.5

79.35

36.3

Associated Gene:

Gene:

MED1

Ensembl Gene ID:

ENSAPLG00000030415

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038535

4191975 - 4205431

13457