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Intron Name: Anas_platyrhynchos_platyrhynchos_28_4221122_4226238_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4221122 - 4226238

Intron Length:

5117

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCG|GTAAGCCTT

5'SS Class:

strong_major

3'SS Sequence:

TTTTCTGTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTAGAT

U12 Branch Point Sequence:

ATGTGGATAACC

Flanking Amino Acid:

NKKLPKELLLRIFSFLDVVT

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.2

0.74

73.1

43.9

Major BPS

0.35

1.2

60.7

45.9

Major PPT

0.88

0.8

84.5

30.4

Minor 5ss

44.3

-0.6

3.2

66.5

44.4

Minor BPS

44.1

-0.4

2.5

61.41

43.9

Associated Gene:

Gene:

FBXL20

Ensembl Gene ID:

ENSAPLG00000013411

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013983

4221027 - 4241181

20155