Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_28_4230737_4231174_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4230737 - 4231174

Intron Length:

438

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAAGGCA

5'SS Class:

major

3'SS Sequence:

TCATTCAATAAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTCAT

U12 Branch Point Sequence:

TTTCATTCAATA

Flanking Amino Acid:

GCLGVGDNALRTFAQNCRNI

Intron Amino Acid Position:

107

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.8

0.7

69.1

35.5

Major BPS

87.6

0.93

0.9

89.3

Major PPT

0.25

1.1

61.1

38.2

Minor 5ss

28.9

-2.4

3.5

38.8

46.5

Minor BPS

55.1

0.16

1.7

70.19

35.9

Associated Gene:

Gene:

FBXL20

Ensembl Gene ID:

ENSAPLG00000013411

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013983

4221027 - 4241181

20155