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Intron Name: Anas_platyrhynchos_platyrhynchos_28_4236002_4237114_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4236002 - 4237114

Intron Length:

1113

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGCTCT

5'SS Class:

strong_major

3'SS Sequence:

TCTTTCCGTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTATTAT

U12 Branch Point Sequence:

TTATTATCGATT

Flanking Amino Acid:

NALGQNCPRLRILEVARCSQ

Intron Amino Acid Position:

273

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.5

0.95

0.8

81.4

33.4

Major BPS

84.7

0.86

74.3

40.7

Major PPT

81.6

0.71

0.9

77.1

31.6

Minor 5ss

46.5

-0.4

2.8

65.7

45.4

Minor BPS

49.5

0.05

1.8

72.73

38.2

Associated Gene:

Gene:

FBXL20

Ensembl Gene ID:

ENSAPLG00000013411

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013983

4221027 - 4241181

20155