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Intron Name: Anas_platyrhynchos_platyrhynchos_28_4239131_4239954_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4239131 - 4239954

Intron Length:

824

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTGAGTGTT

5'SS Class:

strong_major

3'SS Sequence:

CGTTTGGGTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CGCTGAC

U12 Branch Point Sequence:

GGGCCGCTGACC

Flanking Amino Acid:

SIHCPRLQVLSLSHCELITD

Intron Amino Acid Position:

328

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.3

0.85

0.8

83.1

28.6

Major BPS

53.9

0.1

1.2

46.4

38.9

Major PPT

67.4

0.39

1.1

60.9

44.7

Minor 5ss

33.3

-1.9

3.4

45.9

43.7

Minor BPS

41.7

-0.6

2.2

49.83

40.3

Associated Gene:

Gene:

FBXL20

Ensembl Gene ID:

ENSAPLG00000013411

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013983

4221027 - 4241181

20155