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Intron Name: Anas_platyrhynchos_platyrhynchos_28_4240168_4240806_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4240168 - 4240806

Intron Length:

639

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAAAAATT

5'SS Class:

major

3'SS Sequence:

CTTGTCGTTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAA

U12 Branch Point Sequence:

CCGTTTTTAACC

Flanking Amino Acid:

ITRAGIKRLRTHLPNIKVHA

Intron Amino Acid Position:

399

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.9

0.61

77.9

36.7

Major BPS

87.3

0.93

0.8

36.5

Major PPT

79.1

0.66

0.9

72.8

37.5

Minor 5ss

38.3

-1.3

3.2

49.8

46.3

Minor BPS

65.8

0.47

1.3

64.7

41.9

Associated Gene:

Gene:

FBXL20

Ensembl Gene ID:

ENSAPLG00000013411

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013983

4221027 - 4241181

20155