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Intron Name: Anas_platyrhynchos_platyrhynchos_28_4272605_4272974_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4272605 - 4272974

Intron Length:

370

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCG|GTGAGCCCC

5'SS Class:

major

3'SS Sequence:

TTTTCCTCCCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTCAC

U12 Branch Point Sequence:

CTGTTCTCACCC

Flanking Amino Acid:

ILSNTHRQASRIVLSFDFPF

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.5

0.56

57.1

42.2

Major BPS

0.87

0.8

85.6

Major PPT

84.7

0.78

0.7

77.6

31.2

Minor 5ss

34.2

-1.8

44.2

43.2

Minor BPS

49.6

-0

1.9

61.55

44.2

Associated Gene:

Gene:

PLXDC1

Ensembl Gene ID:

ENSAPLG00000023980

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032246

4272404 - 4282296

9893