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Intron Name: Anas_platyrhynchos_platyrhynchos_28_4273955_4274284_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4273955 - 4274284

Intron Length:

330

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCG|GTGAGTCTT

5'SS Class:

strong_major

3'SS Sequence:

TGCTGCCTTTCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCCCAG

U12 Branch Point Sequence:

TCGTGCCCAGCC

Flanking Amino Acid:

MILNPSPEVPESRRRTIYEY

Intron Amino Acid Position:

205

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.7

0.79

0.9

78.2

37.9

Major BPS

43.3

-0.4

1.6

52.1

45.2

Major PPT

77.5

0.62

0.9

73.3

37.2

Minor 5ss

35.2

-1.7

3.2

51.1

45.2

Minor BPS

39.6

-0.8

2.3

51.08

45.7

Associated Gene:

Gene:

PLXDC1

Ensembl Gene ID:

ENSAPLG00000023980

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032246

4272404 - 4282296

9893