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Intron Name: Anas_platyrhynchos_platyrhynchos_28_4274381_4275283_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4274381 - 4275283

Intron Length:

903

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCA|GTAAGTCGG

5'SS Class:

major

3'SS Sequence:

CTCTCCTCTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GCTTCAC

U12 Branch Point Sequence:

TGCTGCTTCACC

Flanking Amino Acid:

MSAVEFTPLPTCLQHQSCEM

Intron Amino Acid Position:

237

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.6

0.53

1.1

57.7

Major BPS

59.7

0.24

1.3

65.3

41.6

Major PPT

82.3

0.73

0.7

76.6

25.4

Minor 5ss

35.8

-1.6

2.9

42.3

Minor BPS

52.1

0.05

2.2

66.74

Associated Gene:

Gene:

PLXDC1

Ensembl Gene ID:

ENSAPLG00000023980

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032246

4272404 - 4282296

9893