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Intron Name: Anas_platyrhynchos_platyrhynchos_28_4275366_4277286_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4275366 - 4277286

Intron Length:

1921

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAGCGTGG

5'SS Class:

major

3'SS Sequence:

TTTCTTGCCGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTAAC

U12 Branch Point Sequence:

GGGGCTTTAACC

Flanking Amino Acid:

FNCSWCHVLQRCSSGFDRHR

Intron Amino Acid Position:

264

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

64.3

0.34

1.3

52.2

47.1

Major BPS

77.3

0.68

79.3

29.4

Major PPT

81.1

0.7

0.8

76.8

31.8

Minor 5ss

40.3

-1.1

3.5

55.4

48.8

Minor BPS

62.4

0.37

1.5

63.51

42.1

Associated Gene:

Gene:

PLXDC1

Ensembl Gene ID:

ENSAPLG00000023980

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032246

4272404 - 4282296

9893