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Intron Name: Anas_platyrhynchos_platyrhynchos_28_4307519_4307698_F

Intron Information:

Intron Rank:

141130

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

4307519 - 4307698

Intron Length:

180

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGTTCT

5'SS Class:

strong_major

3'SS Sequence:

ACGTACACAATAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TATTAAT

U12 Branch Point Sequence:

TTATTATTAATC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.1

0.87

0.9

84.2

27.2

Major BPS

91.8

1.04

0.7

90.2

19.3

Major PPT

52.1

0.05

45.3

35.6

Minor 5ss

44.5

-0.6

2.8

38.4

Minor BPS

67.9

0.54

1.5

76.1

33.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000026014

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020991

4307314 - 4310134

2821