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Intron Name: Anas_platyrhynchos_platyrhynchos_28_4443872_4444758_R


Intron Information:

Intron Rank:
13

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
4443872 - 4444758

Intron Length:
887

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAG|GTATATTTT

5'SS Class:
strong_major

3'SS Sequence:
TACTGGTTTGCAG|A

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTCTAAC

U12 Branch Point Sequence:
TCTGTTCTAACA

Flanking Amino Acid:
NFQGKEISIKEISQETAVNP

Intron Amino Acid Position:
543

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
81.6
0.75
0.9
82.9
29.9

Major BPS
84.6
0.86
0.8
83.9
22.3

Major PPT
75.8
0.58
1
68.8
41.6

Minor 5ss
55.6
0.19
2.5
75.5
40.6

Minor BPS
53.8
0.12
1.8
66.77
40.3

Associated Gene:

Gene:
KAT7

Ensembl Gene ID:

Chromosome:
28

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

4441999 - 4453386
11388

4425670 - 4453386
27717