Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_28_4445184_4446035_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4445184 - 4446035

Intron Length:

852

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTTAGTTTG

5'SS Class:

strong_major

3'SS Sequence:

TTCTTGGTTCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTAAC

U12 Branch Point Sequence:

GATCTGTTAACC

Flanking Amino Acid:

GCHLIGYFSKEKNSFLNYNV

Intron Amino Acid Position:

463

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.4

0.81

1.1

79.9

Major BPS

74.5

0.61

1.1

75.6

36.6

Major PPT

76.7

0.6

0.9

69.1

41.8

Minor 5ss

40.2

-1.1

2.7

46.3

Minor BPS

53.4

0.09

2.1

65.61

39.5

Associated Gene:

Gene:

KAT7

Ensembl Gene ID:

ENSAPLG00000006744

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036332

4441999 - 4453386

11388

ENSAPLT00000007064

4425670 - 4453386

27717