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Intron Name: Anas_platyrhynchos_platyrhynchos_28_4446988_4447308_R


Intron Information:

Intron Rank:
9

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
4446988 - 4447308

Intron Length:
321

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
ATG|GTAAGGTTT

5'SS Class:
strong_major

3'SS Sequence:
TTGCTTGTCATAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTAAAAT

U12 Branch Point Sequence:
TCACCCTGATTT

Flanking Amino Acid:
KSQTILRRHMAKCVWKHPPG

Intron Amino Acid Position:
386

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
85
0.83
0.9
81.3
33.2

Major BPS
70.6
0.51
1.1
75.9
34.4

Major PPT
72.8
0.51
0.9
68.3
37.5

Minor 5ss
42.8
-0.8
3.4
61.3
44.6

Minor BPS
50.1
0.08
1.7
67.33
43.3

Associated Gene:

Gene:
KAT7

Ensembl Gene ID:

Chromosome:
28

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

4425670 - 4453386
27717

4441999 - 4453386
11388