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Intron Name: Anas_platyrhynchos_platyrhynchos_28_4448277_4448445_R


Intron Information:

Intron Rank:
7

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
4448277 - 4448445

Intron Length:
169

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
ATG|GTAAAAGCA

5'SS Class:
major

3'SS Sequence:
TTTCTTGTTCCAG|G

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
CTCTCAT

U12 Branch Point Sequence:
GTGGCAAAAACT

Flanking Amino Acid:
LSKEQKEKYMEHRQTYGNTR

Intron Amino Acid Position:
285

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
73.3
0.55
1
63.8
34.2

Major BPS
82.6
0.81
0.9
83.3
27.7

Major PPT
87.8
0.85
0.8
80.5
37

Minor 5ss
30.2
-2.3
3.4
36.2
42.7

Minor BPS
43.1
-0.4
2.2
62.78
46.7

Associated Gene:

Gene:
KAT7

Ensembl Gene ID:

Chromosome:
28

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

4441999 - 4453386
11388

4425670 - 4453386
27717