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Intron Name: Anas_platyrhynchos_platyrhynchos_28_4449571_4450126_R


Intron Information:

Intron Rank:
4

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
4449571 - 4450126

Intron Length:
556

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
TAG|GTAATTTCA

5'SS Class:
strong_major

3'SS Sequence:
TGATTCTTTGCAG|G

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
TTCTGAT

U12 Branch Point Sequence:
TATTTCTGATTC

Flanking Amino Acid:
KCPTPGCNSLGHLTGKHERH

Intron Amino Acid Position:
194

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
86
0.85
0.9
79.6
29.3

Major BPS
91.3
1.03
0.7
79.6
35.6

Major PPT
82.8
0.74
0.9
77.2
36.8

Minor 5ss
40.6
-1.1
2.7
51.2
45.1

Minor BPS
55.8
0.16
1.7
68.04
37.6

Associated Gene:

Gene:
KAT7

Ensembl Gene ID:

Chromosome:
28

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

4441999 - 4453386
11388

4425670 - 4453386
27717