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Intron Name: Anas_platyrhynchos_platyrhynchos_28_4450734_4451925_R


Intron Information:

Intron Rank:
2

Intron Class:
major-like

Intron Phase:
1

Intron Coordinates:
4450734 - 4451925

Intron Length:
1192

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAG|GTGAATAAT

5'SS Class:
strong_major

3'SS Sequence:
TCCATGAAATTAG|A

3'SS Class:
degenerate_major

U2 Branch Point Sequence:
TAATTAT

U12 Branch Point Sequence:
TTTCCATGAAAT

Flanking Amino Acid:
SSARLSQSSQDSSPVRNPPS

Intron Amino Acid Position:
55

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
85.1
0.83
0.8
85.5
24.8

Major BPS
76.9
0.67
1
66.3
40.4

Major PPT
54.1
0.09
1
52.6
40.5

Minor 5ss
31.3
-2.1
2.9
41.5
45.1

Minor BPS
58
0.33
1.8
81.8
38.4

Associated Gene:

Gene:
KAT7

Ensembl Gene ID:

Chromosome:
28

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

4425670 - 4453386
27717

4441999 - 4453386
11388