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Intron Name: Anas_platyrhynchos_platyrhynchos_28_4463304_4472526_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4463304 - 4472526

Intron Length:

9223

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAACGGGG

5'SS Class:

major

3'SS Sequence:

TGTCCTTGTCTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTGGAA

U12 Branch Point Sequence:

GAAGTCTGAATC

Flanking Amino Acid:

QQRRGDGGRAASVPCAAAGE

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.4

0.55

1.2

58.7

46.2

Major BPS

62.2

0.3

1.4

63.4

44.3

Major PPT

72.5

0.51

0.9

65.6

Minor 5ss

34.2

-1.8

3.6

46.8

48.5

Minor BPS

49.1

-0

1.5

53.79

37.7

Associated Gene:

Gene:

FAM117A

Ensembl Gene ID:

ENSAPLG00000006920

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042272

4463075 - 4478839

15765