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Intron Name: Anas_platyrhynchos_platyrhynchos_28_4472410_4472526_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

4472410 - 4472526

Intron Length:

117

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCT|GTACATCCT

5'SS Class:

weak_major

3'SS Sequence:

TGTCCTTGTCTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTGGAA

U12 Branch Point Sequence:

GAAGTCTGAATC

Flanking Amino Acid:

RRKTKRICVGSSVPCAAAGE

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

54.9

0.12

1.2

53.1

43.7

Major BPS

62.2

0.3

1.4

63.4

44.3

Major PPT

72.5

0.51

0.9

65.6

Minor 5ss

38.1

-1.3

3.4

60.3

Minor BPS

49.1

-0

1.5

53.79

37.7

Associated Gene:

Gene:

FAM117A

Ensembl Gene ID:

ENSAPLG00000006920

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007186

4472301 - 4478839

6539