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Intron Name: Anas_platyrhynchos_platyrhynchos_28_4475097_4475593_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4475097 - 4475593

Intron Length:

497

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAACCCAG

5'SS Class:

major

3'SS Sequence:

CTTTGTTTGCTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTGTAG

U12 Branch Point Sequence:

TGTAGCCGAACC

Flanking Amino Acid:

SWGSADHRREIAKLKQQLQR

Intron Amino Acid Position:

125

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.3

0.55

1.2

59.7

46.7

Major BPS

44.1

-0.3

1.7

45.3

47.5

Major PPT

74.2

0.54

69.2

41.8

Minor 5ss

42.8

-0.8

55.8

48.4

Minor BPS

45.4

-0.3

2.2

62.1

42.5

Associated Gene:

Gene:

FAM117A

Ensembl Gene ID:

ENSAPLG00000006920

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042272

4463075 - 4478839

15765

ENSAPLT00000007186

4472301 - 4478839

6539