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Intron Name: Anas_platyrhynchos_platyrhynchos_28_4475708_4476029_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4475708 - 4476029

Intron Length:

322

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTACGTTCA

5'SS Class:

major

3'SS Sequence:

TGGGTCGTTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CATTAAT

U12 Branch Point Sequence:

GGTGCATTAATC

Flanking Amino Acid:

GDHAVLGSLRDSPSGCLSSS

Intron Amino Acid Position:

163

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.64

1.1

68.8

38.9

Major BPS

79.4

0.73

0.9

79.6

29.1

Major PPT

69.2

0.43

1.1

61.7

44.4

Minor 5ss

-1.2

2.9

41.7

44.9

Minor BPS

57.2

0.2

1.7

65.24

40.2

Associated Gene:

Gene:

FAM117A

Ensembl Gene ID:

ENSAPLG00000006920

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042272

4463075 - 4478839

15765

ENSAPLT00000007186

4472301 - 4478839

6539