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Intron Name: Anas_platyrhynchos_platyrhynchos_28_4476165_4476666_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4476165 - 4476666

Intron Length:

502

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTGAGTGAA

5'SS Class:

strong_major

3'SS Sequence:

GTTTCTTCCCTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTCAG

U12 Branch Point Sequence:

CTCTGCTCAGGC

Flanking Amino Acid:

KEQGDEELLRILDVPDGHRA

Intron Amino Acid Position:

208

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.4

0.76

0.9

73.7

32.5

Major BPS

55.8

0.14

1.6

65.3

43.7

Major PPT

76.9

0.61

0.8

36.5

Minor 5ss

26.1

-2.7

2.9

22.6

37.5

Minor BPS

40.2

-0.7

2.3

49.78

46.8

Associated Gene:

Gene:

FAM117A

Ensembl Gene ID:

ENSAPLG00000006920

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042272

4463075 - 4478839

15765

ENSAPLT00000007186

4472301 - 4478839

6539