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Intron Name: Anas_platyrhynchos_platyrhynchos_28_4477208_4477673_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4477208 - 4477673

Intron Length:

466

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTC|GTAAGTATG

5'SS Class:

major

3'SS Sequence:

CTTCCTCCCACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCACAT

U12 Branch Point Sequence:

CTTCCTCCCACA

Flanking Amino Acid:

CEKVRAFEETSSPGPEHSFQ

Intron Amino Acid Position:

321

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.9

0.54

1.3

74.5

41.9

Major BPS

65.3

0.38

1.1

72.6

33.1

Major PPT

78.3

0.64

0.7

72.3

25.9

Minor 5ss

40.9

-1

2.8

52.1

38.9

Minor BPS

42.5

-0.5

2.2

57.53

Associated Gene:

Gene:

FAM117A

Ensembl Gene ID:

ENSAPLG00000006920

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042272

4463075 - 4478839

15765

ENSAPLT00000007186

4472301 - 4478839

6539