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Intron Name: Anas_platyrhynchos_platyrhynchos_28_4515078_4516624_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4515078 - 4516624

Intron Length:

1547

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGTAAG

5'SS Class:

strong_major

3'SS Sequence:

CCTGCTTCTACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATCTCAT

U12 Branch Point Sequence:

TGTTCCTGACAT

Flanking Amino Acid:

FSSGANDKLKWCLRVNPKGL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.5

0.91

0.9

79.7

35.3

Major BPS

86.1

0.9

0.7

85.7

22.9

Major PPT

78.6

0.64

0.8

71.8

32.8

Minor 5ss

35.2

-1.7

2.7

39.3

40.3

Minor BPS

58.2

0.33

1.9

79.39

Associated Gene:

Gene:

SPOP

Ensembl Gene ID:

ENSAPLG00000007134

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029398

4514521 - 4527639

13119

ENSAPLT00000007422

4510332 - 4526487

16156