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Intron Name: Anas_platyrhynchos_platyrhynchos_28_4516777_4516881_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4516777 - 4516881

Intron Length:

105

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTGTGTAAA

5'SS Class:

major

3'SS Sequence:

GTCTTTCTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AAGTCAT

U12 Branch Point Sequence:

GTTGTTTGAAGC

Flanking Amino Acid:

NAKGEETKAMESQRAYRFVQ

Intron Amino Acid Position:

118

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.8

0.61

71.9

34.7

Major BPS

68.2

0.45

1.1

69.4

37.7

Major PPT

86.8

0.83

0.7

84.6

30.4

Minor 5ss

35.2

-1.7

2.6

42.2

Minor BPS

47.6

-0.2

1.8

58.9

40.5

Associated Gene:

Gene:

SPOP

Ensembl Gene ID:

ENSAPLG00000007134

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029398

4514521 - 4527639

13119

ENSAPLT00000007422

4510332 - 4526487

16156