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Intron Name: Anas_platyrhynchos_platyrhynchos_28_4521363_4521797_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4521363 - 4521797

Intron Length:

435

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGATCC

5'SS Class:

strong_major

3'SS Sequence:

TTCTCTGCTACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTTAAT

U12 Branch Point Sequence:

AGGATCTTAATA

Flanking Amino Acid:

FEHEMEESKKNRVEINDVEP

Intron Amino Acid Position:

239

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.9

0.96

0.8

78.6

29.6

Major BPS

0.92

0.9

86.2

29.1

Major PPT

81.7

0.71

0.8

76.1

32.6

Minor 5ss

39.2

-1.2

51.6

45.1

Minor BPS

61.7

0.36

1.3

62.85

37.5

Associated Gene:

Gene:

SPOP

Ensembl Gene ID:

ENSAPLG00000007134

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029398

4514521 - 4527639

13119

ENSAPLT00000007422

4510332 - 4526487

16156