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Intron Name: Anas_platyrhynchos_platyrhynchos_28_4521921_4525528_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4521921 - 4525528

Intron Length:

3608

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACAGTTG

5'SS Class:

major

3'SS Sequence:

TTGTATTTTGCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTGTAT

U12 Branch Point Sequence:

TTCGTTGTAACT

Flanking Amino Acid:

ADDLLAAADKYALERLKVMC

Intron Amino Acid Position:

280

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.3

0.5

1.1

63.9

42.9

Major BPS

71.5

0.53

1.4

71.7

44.6

Major PPT

85.8

0.81

0.8

80.8

36.4

Minor 5ss

38.6

-1.3

3.6

55.1

49.1

Minor BPS

51.7

0.13

2.1

74.22

43.6

Associated Gene:

Gene:

SPOP

Ensembl Gene ID:

ENSAPLG00000007134

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029398

4514521 - 4527639

13119

ENSAPLT00000007422

4510332 - 4526487

16156