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Intron Name: Anas_platyrhynchos_platyrhynchos_28_4525672_4526342_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4525672 - 4526342

Intron Length:

671

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTA|GTGAGTTTA

5'SS Class:

major

3'SS Sequence:

CTTTTATTTCTAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTTAT

U12 Branch Point Sequence:

TTTTCTTTTATT

Flanking Amino Acid:

LKTQAVDFINYHASDVMETS

Intron Amino Acid Position:

327

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.9

0.61

0.9

75.6

29.2

Major BPS

84.1

0.85

0.9

75.3

39.4

Major PPT

84.7

0.78

0.7

77.8

35.6

Minor 5ss

40.2

-1.1

2.9

50.7

41.2

Minor BPS

75.6

0.89

1.5

91.64

31.3

Associated Gene:

Gene:

SPOP

Ensembl Gene ID:

ENSAPLG00000007134

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029398

4514521 - 4527639

13119

ENSAPLT00000007422

4510332 - 4526487

16156