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Intron Name: Anas_platyrhynchos_platyrhynchos_28_4575223_4575869_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

4575223 - 4575869

Intron Length:

647

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCG|GTAAGGAAG

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTTTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AAAACAA

U12 Branch Point Sequence:

TTTTTTTTTTTT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.8

0.73

69.9

42.1

Major BPS

48.1

-0.1

0.9

53.4

30.8

Major PPT

100

1.12

0.4

100

Minor 5ss

32.1

-2

3.1

40.5

45.5

Minor BPS

43.9

-0.3

3.5

78.47

38.5

Associated Gene:

Gene:

PHOSPHO1

Ensembl Gene ID:

ENSAPLG00000012201

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032812

4574857 - 4581820

6964

ENSAPLT00000027610

4574857 - 4582740

7884