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Intron Name: Anas_platyrhynchos_platyrhynchos_28_4577187_4580087_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

4577187 - 4580087

Intron Length:

2901

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTGAGTCAT

5'SS Class:

strong_major

3'SS Sequence:

TTGTGGTTTGCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AAGTGAT

U12 Branch Point Sequence:

AAGTGATTAACC

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.9

0.8

0.9

75.8

35.2

Major BPS

64.7

0.36

1.2

55.1

42.1

Major PPT

79.3

0.66

72.9

42.2

Minor 5ss

30.6

-2.2

2.9

Minor BPS

51.4

0.02

63.33

41.7

Associated Gene:

Gene:

PHOSPHO1

Ensembl Gene ID:

ENSAPLG00000012201

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041982

4574857 - 4582740

7884