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Intron Name: Anas_platyrhynchos_platyrhynchos_28_4580205_4581061_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4580205 - 4581061

Intron Length:

857

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTCAGTGTG

5'SS Class:

strong_major

3'SS Sequence:

TTCCACCTCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GACTAAC

U12 Branch Point Sequence:

TTGGGCTTTACT

Flanking Amino Acid:

EGVGLPCLFKGVGMASSQPP

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.73

1.2

76.2

39.9

Major BPS

59.1

0.23

1.2

61.6

34.1

Major PPT

75.2

0.57

0.8

68.4

31.6

Minor 5ss

31.7

-2.1

3.1

40.6

45.6

Minor BPS

0.14

2.2

75.67

46.9

Associated Gene:

Gene:

PHOSPHO1

Ensembl Gene ID:

ENSAPLG00000012201

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041982

4574857 - 4582740

7884

ENSAPLT00000012705

4574857 - 4581820

6964