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Intron Name: Anas_platyrhynchos_platyrhynchos_28_4585380_4587877_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

4585380 - 4587877

Intron Length:

2498

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGTGTCTG

5'SS Class:

strong_major

3'SS Sequence:

TGCACAGGGTTAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTTGCAC

U12 Branch Point Sequence:

ATGGTTTGCACA

Flanking Amino Acid:

VEANISCVAQHTDAEVP*

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.4

0.76

0.9

70.5

41.4

Major BPS

65.1

0.38

1.4

77.4

37.4

Major PPT

48.1

-0.1

1.1

43.2

42.3

Minor 5ss

38.5

-1.3

2.9

47.2

Minor BPS

43.6

-0.5

1.9

53.29

39.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000021605

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028898

4585356 - 4589075

3720