Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_28_4604778_4604975_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4604778 - 4604975

Intron Length:

198

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGTGTCT

5'SS Class:

major

3'SS Sequence:

TCCTCCCCTCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CGGTGAC

U12 Branch Point Sequence:

GCTGCGGTGACC

Flanking Amino Acid:

LSRFASASIKIAPPETPDSK

Intron Amino Acid Position:

395

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.8

0.49

1.1

65.9

40.4

Major BPS

47.5

-0.1

1.3

38.2

41.7

Major PPT

78.7

0.65

0.7

69.6

31.2

Minor 5ss

-1.3

3.6

56.7

47.6

Minor BPS

41.3

-0.7

2.6

53.74

44.7

Associated Gene:

Gene:

IGF2BP1

Ensembl Gene ID:

ENSAPLG00000012620

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024335

4602291 - 4631735

29445

ENSAPLT00000013209

4603320 - 4631273

27954