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Intron Name: Anas_platyrhynchos_platyrhynchos_28_4649353_4650397_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4649353 - 4650397

Intron Length:

1045

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAAGTGTT

5'SS Class:

strong_major

3'SS Sequence:

ACTCTTACTGTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTTAC

U12 Branch Point Sequence:

TCTATCTGTACT

Flanking Amino Acid:

SFVLMEENVSGISIRTPSAR

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.8

0.91

0.9

85.2

32.2

Major BPS

69.2

0.48

37.1

Major PPT

72.7

0.51

0.8

67.2

33.2

Minor 5ss

38.2

-1.3

3.4

49.9

46.4

Minor BPS

51.8

0.14

1.9

73.15

43.4

Associated Gene:

Gene:

GIP

Ensembl Gene ID:

ENSAPLG00000013204

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013751

4649225 - 4654811

5587

ENSAPLT00000031206

4647017 - 4655089

8073

ENSAPLT00000024493

4649225 - 4654204

4980